Francisco A. Rodrigues Website

Francisco Rodrigues

Complex Systems and Data Science | University of São Paulo


   For citation information and all publications, see my Google Scholar page.
    Book

  1. Emanuele Cozzo, Guilherme Ferraz de Arruda, Francisco A. Rodrigues, Yamir Moreno
    An Introduction to Multiplex Networks: Basic Formalism and Structural Properties
    Book. Springer Briefs in Complexity, (2018)   

    Reviews

  1. Cesar H. Comin, Thomas K. DM. Peron, Filipi N. Silva, Diego R. Amancio, Francisco A. Rodrigues, Luciano da F. Costa
    Complex systems: features, similarity and connectivity
    Physics Reports, volume 861, pages 1-41 (2020).
    Link to pdf   pre-print: Arxiv

  2. Guilherme F. de Arruda, Francisco A. Rodrigues, and Yamir Moreno
    Fundamentals of spreading processes in single and multilayer complex networks
    Physics Reports, Volume 756, Pages 1-60 (2018).
    Link to pdf   Pre-print: Arxiv


  3. Francisco A. Rodrigues, Thomas K.DM. Peron, Peng Ji, Jürgen Kurths
    The Kuramoto model in complex networks
    Physics Reports, V. 610, Pages 1–98, (2016).
    Link to pdf  Pre-print: Arxiv

  4. Luciano da F.Costa, Osvaldo N. Oliveira Jr., Gonzalo Travieso, Francisco A. Rodrigues, Paulino R. Villas Boas, Lucas Antiqueira, Matheus P. Viana, Luis E. C. da Rocha
    Analyzing and Modeling Real-World Phenomena with Complex Networks: A Survey of Applications
    Advances in Physics, 60:3, pg 329-412, (2011).
    Link to pdf  Pre-print: Arxiv

  5. Luciano da F. Costa, Francisco A. Rodrigues, Gonzalo Travieso and P. R. Villas Boas
    Characterization of complex networks: A survey of measurements
    Advances in Physics,56, 167 - 242, 1, (2007).
    Link to pdf 



    2022

  1. Guilherme Ferraz de Arruda, Lucas G. S. Jeub, Angélica S. Mata, Francisco A. Rodrigues, and Yamir Moreno
    From subcritical behavior to elusive transitions in rumor models
    Nature Communications, (2022).
    Link to pdf (Open access)  

  2. Ginestra Bianconi, Alex Arenas, Jacob Biamonte, Lincoln D. Carr, Byungnam Kahng, Janos Kertesz, Jürgen Kurths, Linyuan Lü, Cristina Masoller, Adilson E. Motter, Matjaz Perc, Filippo Radicchi, Ramakrishna Ramaswamy, Francisco A. Rodrigues, Marta Sales-Pardo, Maxi San Miguel, Stefan Thurner, Taha Yasseri
    Complex systems in the spotlight: next steps after the 2021 Nobel Prize in Physics
    Journal of Physics: Complexity, accepted (2022).

  3. Kirstin Roster, Colm Connaughton, and Francisco A. Rodrigues
    Forecasting new diseases in low-data settings using transfer learning
    Chaos, Solitons and Fractals, (2022).
    Pre-print: Arxiv

  4. Luiz G. A. Alves, Giuseppe Mangioni, Francisco A. Rodrigues, Pietro Panzarasa, and Yamir Moreno
    The rise and fall of countries in the global value chains
    Scientific Reports, (2022).
    Link to pdf (Open access)  

  5. Caroline L. Alves, Aruane M. Pineda, Kirstin Roster, Christiane Thieleman and Francisco A. Rodrigues
    EEG functional connectivity and deep learning for automatic diagnosis of brain disorders: Alzheimer's disease and schizophrenia
    Journal of Physics: Complexity, (2022).
    Link to pdf (Open access)  

  6. C. T. Martinez-Martinez, J. A. Mendez-Bermudez, Francisco A. Rodrigues, and Ernesto Estrada
    Nonuniform random graphs on the plane: A scaling study
    Physical Review E, 105, 034304, (2022).
    Link to pdf   Pre-print: Arxiv

  7. Paulo Cesar Ventura, Alberto Aleta, Francisco A. Rodrigues, and Yamir Moreno
    Modeling the effects of social distancing on the large-scale spreading of diseases
    Epidemics, volume 38, 100544, (2022).
    Link to pdf (Open access)  

  8. Guillermo L. Florez-Montero1, Renata L. Muylaert, Marcelo R. Nogueira, Cullen Geiselman, Sharlene E. Santana, Richard D. Stevens, Marco Tschapka, Francisco A. Rodrigues, Marco A. R. Mello
    NeoBat Interactions: a data set of bat-plant interactions in the Neotropics
    Ecology, e3640, (2022).
    Link to pdf (Open access)  

  9. Paulo C. Ventura, Alberto Aleta, Francisco A. Rodrigues and Yamir Moreno
    Epidemic spreading in populations of mobile agents with adaptive behavioral response
    Chaos, Solitons and Fractals, 156, 111849, (2022).
    Link to pdf   Pre-print: Arxiv

  10. Kirstin Roster, Colm Connaughton and Francisco A. Rodrigues
    Machine Learning Based Forecast of Dengue Fever in Brazilian Cities using Epidemiological and Meteorological Variables
    American Journal of Epidemiology, accepted, (2022).
    Link to pdf   Pre-print: BioRxiv

  11. Michel Alexandre, Kauê de Moraes, and Francisco A. Rodrigues
    Risk-dependent centrality in the Brazilian stock market
    Journal of Complex Networks, volume 10, Issue 1 (2022).
    Link to pdf   Pre-print: Arxiv


  12. 2021

  13. Michel Alexandre, Thiago Christiano Silva, Colm Connaughton and Francisco A. Rodrigues
    The drivers of systemic risk in financial networks: a data-driven machine learning analysis
    Chaos, Solitons and Fractals: the interdisciplinary journal of Nonlinear Science, and Nonequilibrium and Complex Phenomena, Volume 153, Part 1, (2021).
    Link to pdf  

  14. Pedro Ramos, Francisco A. Rodrigues Dipak K. Dey and Francisco Louzada
    Power-law distributions in objective priors
    Statistica Sinica (2021).
    Link to pdf   Pre-print: Arxiv

  15. Tim Kittel, Catrin Ciemer, Nastaran Lotfi, Thomas Peron, Francisco A. Rodrigues, Jürgen Kurths, and Reik V. Donner
    Evolving climate network perspectives on global surface air temperature effects of ENSO and strong volcanic eruptions
    The European Physical Journal Special Topics (2021).
    Link to pdf   Pre-print: Arxiv

  16. Pedro Luiz Ramos, Luciano da Fontoura Costa, Francisco Louzada and Francisco A. Rodrigues
    Power laws in the Roman Empire: a survival analysis
    Royal Society Open Science, Volume 8, Issue 7 (2021).
    Link to pdf 

  17. Paulo C. Ventura, Yamir Moreno and Francisco A. Rodrigues
    The role of time scale in the spreading of asymmetrically interacting diseases
    Physical Review Research 3 (1), 013146 (2021).
    Link to pdf   Pre-print: Arxiv

  18. Vera L. D. Tomazella, Sandra Rêgo de Jesus, Amanda B. Gazon, Francisco Louzada, Saralees Nadarajah, Diego C. Nascimento, Francisco A. Rodrigues and Pedro Luiz Ramos
    Bayesian Reference Analysis for the Generalized Normal Linear Regression Model
    Symmetry, 13, 856 (2021).
    Link to pdf 

  19. Kirstin Roster, Colm Connaughton, and Francisco A. Rodrigues
    Estimating the causal effect of mobility on Dengue during the COVID-19 pandemic
    International Journal of Epidemiology, Volume 50, (2021).
    Link to pdf 

  20. Aruane Pineda and Francisco A. Rodrigues
    Complex Networks to Differentiate Elderly and Young People
    Annual International Conference on Information Management and Big Data, SIMBig 2020 (2021).
    Link to pdf 

  21. Fabiano Rodrigues, Francisco A. Rodrigues, Thelma V. R. Rodrigues
    Modelos de machine learning para predição do sucesso de startups
    Revista de Gestão e Projetos 12 (2), 28-55 (2021).
    Link to pdf 


  22. 2020

  23. Cesar H. Comin, Thomas K. DM. Peron, Filipi N. Silva, Diego R. Amancio, Francisco A. Rodrigues, Luciano da F. Costa
    Complex systems: features, similarity and connectivity
    Physics Reports, Volume 861, Pages 1-41 (2020).
    Link to pdf   pre-print: Arxiv

  24. T. Peron, B. Messias, J. A. Méndez-Bermúdez,Francisco A. Rodrigues, and Luciano da F. Costa
    Spacing ratio characterization of the spectra of directed random networks
    Physical Review E, 102, 06230 (2020).
    Link to pdf   Pre-print: Arxiv

  25. R. Aguilar-Sánchez, J. A. Méndez-Bermúdez, Francisco A. Rodrigues, and J. M. Sigarreta
    Topological versus spectral properties of random geometric graphs
    Physical Review E, 102, 042306 (2020).
    Link to pdf   Pre-print: Arxiv

  26. Guilherme F. de Arruda, J. A. Méndez-Bermúdez, Francisco A. Rodrigues and Yamir Moreno
    Universality of eigenvector delocalization and the nature of the SIS phase transition in multiplex networks
    Journal of Statistical Mechanics (JSTAT), 103405, (2020).
    Link to pdf   Pre-print: Arxiv

  27. Mohammad Noorbakhsh, Colm Connaughton and Francisco A. Rodrigues
    Discovering causal factors of drought in Ethiopia
    Climate Informatics, 2020, 10th International Conference on Climate Dynamics, accepted (2020).
    Pre-print: Arxiv

  28. Fátima Velásquez-Rojas, Paulo Cesar Ventura da Silva, Colm Connaughton, Yamir Moreno, Francisco A. Rodrigues, and Federico Vazquez
    Disease and information spreading at different speeds in multiplex networks
    Physical Review E, 102, 022312 (2020).
    Link to pdf   Pre-print: Arxiv

  29. Diogo H. Silva, Francisco A. Rodrigues, Silvio C. Ferreira
    High prevalence regimes in the pair-quenched mean-field theory for the susceptible-infected-susceptible model on networks
    Physical Review E, 102, 012313 (2020).
    Link to pdf   Pre-print: Arxiv

  30. Thomas Peron, Deniz Eroglu, Francisco A. Rodrigues, and Yamir Moreno
    Collective dynamics of random Janus oscillator networks
    Physical Review Research, 2, 013255 (2020).
    Link to pdf   Pre-print: Arxiv

  31. Manuel Ciba, Robert Bestel, Crhistoph Nick,Guilherme F. de Arruda, Thomas K. D. Peron, César Comin, Luciano da F. Costa, Francisco A. Rodrigues, Cristiane Thielemann
    Comparison of different spike train synchrony measures regarding their robustness to erroneous data from bicuculline induced epileptiform activity
    Neural Computation, 32, 887–911 (2020).
    Link to pdf  

  32. Luiz G. A. Alves, Alberto Aleta, Francisco A. Rodrigues, Yamir Moreno and Luís A. Nunes Amaral
    Centrality anomalies in complex networks as a result of model over-simplification
    New Journal of Physics, 22, 013043 (2020).
    Link to pdf   Pre-print: Arxiv

  33. Guilherme Ferraz de Arruda, Giovanni Petri, Francisco A. Rodrigues, and Yamir Moreno
    Impact of the distribution of recovery rates on disease spreading in complex networks
    Physical Review Research, 2, 013046, (2020).
    Link to pdf   Pre-print: Arxiv

  34. Didier A. Vega-Oliveros, Luciano da F. Costa and Francisco A. Rodrigues
    Influence maximization on correlated networks through community identification
    Communications in Nonlinear Science and Numerical Simulation, 105094 (2020).
    Link to pdf   pre-print: Arxiv


  35. 2019

  36. Marco A. R. Mello, Gabriel M. F. Felix, Rafael B. P. Pinheiro, Renata L. Muylaert, Cullen Geiselmann, Sharlene Santana, Marco Tschapka, Nastaran Lofti, Francisco A. Rodrigues and Richard D. Stevens
    Insights on the assembly rules of a continent-wide multilayer network
    Nature Ecology and Evolution, 1525–1532 (2019).
    Link to pdf   Read online

  37. Thomas Peron, Bruno Messias, Angélica S. Mata, Francisco A. Rodrigues, and Yamir Moreno
    On the onset of synchronization of Kuramoto oscillators in scale-free networks
    Physical Review E, 100, 042302 (2019).
    Link to pdf   Pre-print: Arxiv

  38. Paulo César Ventura, Fátima Velásquez-Rojas, Colm Connaughton, Federico Vazquez, Yamir Moreno and Francisco A. Rodrigues
    Epidemic spreading with awareness and different time scales in multiplex networks
    Physical Review E, 100, 032313 (2019).
    Link to pdf   Pre-print: Arxiv

  39. Emanuele Cozzo, Guilherme F. de Arruda, Francisco A. Rodrigues, and Yamir Moreno
    Layer degradation triggers an abrupt structural transition in multiplex networks
    Physical Review E, 100, 012313, (2019).
    Link to pdf   pre-print: Arxiv

  40. Paulo F. Gomes, Sandro M. Reia Francisco A. Rodrigues and José F. Fontanari
    Mobility helps problem-solving systems to avoid Groupthink
    Physical Review E, 99 (3), 032301, (2019).
    Link to pdf   pre-print: Arxiv

  41. J. A. Méndez-Bermúdez, Francisco A. Rodrigues, and Didier A. Vega-Oliveros
    Multifractality in random networks with power-law decaying bond strengths
    Physical Review E, 99, 042303, (2019).
    Link to pdf

  42. Mayra Z. Rodriguez, Cesar H. Comin, Dalcimar Casanova, Odemir M. Bruno, Diego R. Amancio, Luciano da F. Costa, Francisco A. Rodrigues
    Clustering Algorithms: A Comparative Approach,
    PLOS One, 14(1):e0210236 (2019).
    Link to pdf (Open access)

  43. Luiz G. A. Alves, Giuseppe Mangioni, Isabella Cingolani, Francisco A. Rodrigues, Pietro Panzarasa, and Yamir Moreno
    The nested structural organization of the worldwide trade multi-layer network
    Scientific Reports - Nature, 9, number 2866, (2019).
    Link to pdf   pre-print: Arxiv

  44. Luiz Gustavo Alves, Haroldo V. Ribeiro and Francisco A. Rodrigues
    The role of city size and urban metrics on crime modeling
    Book Chapter to apper in "Understanding Crime through Science - Interdisciplinary Analysis and Modeling of Criminal Activities" by Springer.
    pre-print: Arxiv


  45. 2018

  46. Luiz G. A. Alves, Giuseppe Mangioni, Francisco A. Rodrigues, Pietro Panzarasa and Yamir Moreno
    Unfolding the complexity of the global value chain: Strengths and entropy in the single-layer, multiplex, and multi-layer international trade networks
    Entropy, 20(12), 909, (2018).
    Link to pdf (Open access)

  47. Guilherme F. de Arruda, Emanuele Cozzo, Francisco A. Rodrigues, and Yamir Moreno
    A polynomial eigenvalue approach for multilayer networks
    New Journal of Physics, 20, 095004 (2018).
    Link to pdf   pre-print: Arxiv

  48. Guilherme F. de Arruda, Francisco A. Rodrigues, and Yamir Moreno
    Fundamentals of spreading processes in single and multilayer complex networks
    Physics Reports, Volume 756, Pages 1-60 (2018).
    Link to pdf   Pre-print: Arxiv

  49. Thomas K.DM. Peron, Peng Ji, Jürgen Kurths, Francisco A. Rodrigues
    Spectra of random networks in the low clustering regime,
    Europhysics Letters (EPL), Volume 121, Number 6 (2018).
    Link to pdf   Pre-print: Arxiv

  50. Emanuele Cozzo, Guilherme Ferraz de Arruda, Francisco A. Rodrigues, Yamir Moreno
    An Introduction to Multiplex Networks: Basic Formalism and Structural Properties
    Book. Springer Briefs in Complexity, (2018) 

  51. Guilherme Ferraz de Arruda, Emanuele Cozzo, Pablo Martín Rodríguez, Francisco A. Rodrigues and Yamir Moreno
    A general Markov chain approach for disease and rumour spreading in complex networks,
    Journal of Complex Networks, Volume 6, Issue 2, Pages 215–242 (2018).
    Link to pdf  Pre-print: Arxiv
    Codes on GitHub

  52. Luiz G. Andrade Alves, Haroldo V. Robeiro and Francisco A. Rodrigues
    Crime prediction through urban metrics and statistical learning
    Physica A, vol. 505, 1, (2018).
    Link to pdf  Pre-print: Arxiv

  53. Nastaran Lotfi, Amir Darooneh and Francisco A. Rodrigues
    Centrality in earthquake multiplex networks
    Chaos: An Interdisciplinary Journal of Nonlinear Science, 28, 063113, (2018).

  54. Mayra Z. Pimenta, Cesar H. Comin, Francisco A. Rodrigues and Luciano da F. Costa
    The impact of interconnecting topologies on SOM neural networks
    IJCNN, IEEE International Joint Conference on Neural Networks (2018).
    Link to pdf


  55. 2017

  56. Francisco A. Rodrigues
    Network centrality: an introduction
    Book Chapter to apper in "From nonlinear dynamics to complex systems: A Mathematical modeling approach" by Springer.
    Link to pdf

  57. Guilherme F. de Arruda, Emanuele Cozzo, Tiago Peixoto, Francisco A. Rodrigues and Yamir Moreno
    Disease localization in multilayer networks
    Physical Review X, 7, 011014, (2017).
    Link to pdf (Open access)

  58. J. A. Méndez-Bermúdez, Guilherme Ferraz de Arruda, Francisco A. Rodrigues, Yamir Moreno
    Scaling properties of multilayer random networks,
    Physical Review E, 96, 012307 (2017).
    Link to pdf  pre-print: Arxiv

  59. Didier A. Vega-Oliveros, Luciano da F. Costa and Francisco A. Rodrigues
    Rumor propagation with heterogeneous transmission in social networks,
    Journal of Statistical Mechanics: Theory and Experiment, Volume 2017 (2017).
    Link to pdf  pre-print: Arxiv

  60. J. A. Méndez-Bermúdez, Guilherme Ferraz de Arruda, Francisco A. Rodrigues, Yamir Moreno
    Diluted banded random matrices: scaling behavior of eigenfunction and spectral properties,
    Journal of Physics A: Mathematical and Theoretical, Volume 50, Number 49 (2017).
    Link to pdf  pre-print: Arxiv

  61. Oscar Q. Linhares, Glenda M. Botelho, Ivar V. Belizario, Francisco A. Rodrigues and João B. E. S. Neto
    Segmentation of large images based on super-pixels and community detection in graphs,
    IET Image Processing, Volume 11, Issue 12 (2017).
    Link to pdf  pre-print: Arxiv

  62. Didier A. Vega-Oliveros, Lilian Berton, Federico Vazquez, Francisco A. Rodrigues
    The impact of social curiosity on information spreading on networks,
    IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining (2017).
    Link to pdf  pre-print: Arxiv


  63. 2016

  64. Francisco A. Rodrigues, Thomas K.DM. Peron, Peng Ji, Jürgen Kurths
    The Kuramoto model in complex networks
    Physics Reports, V. 610, Pages 1–98, (2016).
    Link to pdf  Pre-print: Arxiv

  65. Thomas K. DM. Peron, Jürgen Kurths, Francisco A. Rodrigues, Lutz Schimansky-Geier, and Bernard Sonnenschein
    Traveling phase waves in asymmetric networks of noisy chaotic attractors
    Physical Rewiew E, 96, 042210, (2016).
    Link to pdf  Pre-print: Arxiv

  66. José F. Fontanari and Francisco A. Rodrigues
    Influence of network topology on cooperative problem-solving systems
    Theory in Biosciences, vol. 35, issue 3, p. 101-110, (2016).
    Link to pdf  Pre-print: Arxiv

  67. Paul Schultz, Thomas Peron, Deniz Eroglu, Thomas Stemler, G. Marcelo Ramírez Ávila, Francisco A. Rodrigues, Jürgen Kurths
    Tweaking synchronization by connectivity modifications
    Physical Rewiew E, 93, 062211, (2016).
    Link to pdf  Pre-print: Arxiv

  68. Guilherme F. de Arruda, Emanuele Cozzo, Yamir Moreno and Francisco A. Rodrigues
    On degree-degree correlations in multilayer networks
    Physica D, volumes 323–324, 1 (2016).
    Link to pdf  Pre-print: Arxiv

  69. Débora C. Corrêa and Francisco A. Rodrigues
    A survey of symbolic-based music genre classification
    Expert Systems with Applications, Volume 60, Pages 190–210, (2016).
    Link to pdf 

  70. Emanuele Cozzo, Guilherme Ferraz de Arruda, Francisco A. Rodrigues, Yamir Moreno
    Multilayer networks: metrics and spectral properties
    Book Chapter in Interconnected Networks (Springer).
    Link to pdf  Pre-print: Arxiv

  71. Filipi N. Silva, Cesar H. Comin, Thomas K. DM. Peron, Francisco A. Rodrigues, Cheng Ye, Richard C. Wilson, Edwin Hancock, Luciano da F. Costa
    Concentric network symmetry
    Information Sciences, vol. 333, pages 61-80 (2016).
    Link to pdf  Pre-print: Arxiv


  72. 2015

  73. Francisco A. Rodrigues
    The impact of information spreading on disease dynamics: Comment on “Coupled disease–behavior on complex networks: A review”
    Physics of Life Reviews, Volume 15, Pages 37–38 (2015).
    Link to pdf 

  74. Cheng Ye, Richard C. Wilson, César H. Comin, Thomas K. D. M. Peron, Filipi N. Silva, Francisco A. Rodrigues, Luciano da F. Costa, Andrea Torsello, and Edwin R. Hancock
    Thermodynamic characterization of networks using graph polynomials
    Physical Review E, 92, 032810, (2015).
    Link to pdf 

  75. Guilherme F. de Arruda, Elcio Lebensztayn, Francisco A. Rodrigues and Pablo M. Rodriguez
    A process of rumor scotching on finite populations
    Royal Society Open Science, v. 2, 150240, (2015).
    Link to pdf (Open access) 

  76. Bernard Sonnenschein, Thomas K. DM. Peron, Francisco A. Rodrigues, Jürgen Kurths and Lutz Schimansky-Geier
    Collective dynamics in two populations of noisy oscillators with asymmetric interactions
    Physical Review E, 91, 062910, (2015).
    Link to pdf 

  77. Thomas K.DM. Peron, Peng Ji, Francisco A. Rodrigues, Jürgen Kurths
    Effect of assortative mixing in the second-order Kuramoto model
    Physical Review E, 91, 062910, (2015).
    Link to pdf 

  78. J. A. Méndez-Bermúdez,A. Alcazar-López, A. J. Martínez-Mendoza, Francisco A. Rodrigues and Thomas K. DM. Peron
    Universality in the spectral and eigenfunction properties of random networks
    Physical Review E, 91, 032122, (2015).
    Link to pdf 

  79. Marco Aurelio Ribeiro Mello, Francisco Aparecido Rodrigues, Luciano da Fontoura Costa, W. Daniel Kissling, Cagan Sekercioglu, Flavia Maria Darcie Marquitti, Elisabeth Klara Viktoria Kalko
    Keystone species in seed dispersal networks are mainly determined by dietary specialization
    Oikos, 124, vol. 8, (2015).
    Link to pdf 

  80. Oscar Cuadros Linares, Glenda Botelho, Francisco Aparecido Rodrigues, and João Batista Neto
    An Adjustable Error Measure for Image Segmentation Evaluation
    Brazilian Symposium on Computer Graphics and Image Processing (SIBGRAPI) (2015).
    Link to pdf 


  81. 2014

  82. Peng Ji, Thomas K. DM. Peron, Francisco A. Rodrigues, and Jürgen Kurths
    Analysis of cluster explosive synchronization in complex networks
    Physical Review E, 90, 062810, (2014).
    Link to pdf 

  83. Deniz Eroglu, Thomas K. DM. Peron, Norbert Marwan, Francisco A. Rodrigues, Luciano da F. Costa, Michael Sebek, Istvan Kiss, and Jürgen Kurths
    Entropy of weighted recurrence plots
    Physical Review E, 90, 042919, (2014).
    Link to pdf 

  84. Guilherme F. de Arruda, André L. Barbieri, Luciano da F. Costa, Pablo M. Rodriguez, Yamir Moreno and Francisco A. Rodrigues
    Role of centrality for the identification of influential spreaders in complex networks
    Physical Review E, 90, 032812, (2014).
    Link to pdf 

  85. K. S. Conceição, W. Ulrich. C. A. Diniz, F. A. Rodrigues and M. G. Andrade
    A generalized approach to the modeling of the species-area relationship
    PLoS ONE, 9(8): e105132, (2014).
    Link to pdf 

  86. Bernard Sonnenschein, Thomas K. DM. Peron, Francisco A. Rodrigues, Jürgen Kurths, and Lutz Schimansky-Geier
    Cooperative behavior between oscillatory and excitable units: the peculiar role of positive coupling-frequency correlations
    European Physical Journal B, Springer, 87: 182, (2014).
    Link to pdf 

  87. Peng Ji, Thomas K.DM. Peron, Francisco A. Rodrigues, Jürgen Kurths
    Low-dimensional behavior of Kuramoto model with inertia in complex networks
    Scientific Reports - Nature, v. 4, n. 4783, (2014).
    Link to pdf 

  88. Thomas .K.D. Peron, C.H. Comin, D.R. Amancio, L.F. Costa, Francisco .A. Rodrigues, and Jürgen Kurths
    Correlations between climate network and relief data
    Nonlinear Processes in Geophysics, 21, 1127-1132, (2014).
    Link to pdf 

  89. Diego Raphael Amancio, Cesar Henrique Comin, Dalcimar Casanova, Gonzalo Travieso, Odemir Martinez Bruno, Francisco A. Rodrigues and Luciano da Fontoura Costa
    A systematic comparison of supervised classifiers
    PLoS ONE, 9(4), e94137 (2014).
    Link to pdf 


  90. 2013

  91. Peng Ji, Thomas K. DM. Peron, Peter J. Menck, Francisco A. Rodrigues, and Jürgen Kurths
    Cluster explosive synchronization in complex networks
    Physical Review Letters, 110, 218701 (2013).
    Link to pdf 

  92. Guilherme Ferraz de Arruda, Luciano da Fontoura Costa, Dirk Schubert, and Francisco A. Rodrigues
    Structure and dynamics of functional networks in child-onset schizophrenia
    Clinical Neurophysiology, 2013., vol. 125, issue 8, Pages 1589–1595, (2013).
    Link to pdf 

  93. Thomas Kauê Dal'Maso Peron, Francisco A. Rodrigues, Jürgen Kurths
    Synchronization in random clustered networks
    Physical Review E, 87, 032807 (2013).
    Link to pdf 

  94. Filipi Nascimento Silva, Francisco A. Rodrigues, Osvaldo Novais de Oliveira Junior, Luciano da Fontoura Costa
    Quantifying the interdisciplinarity of scientific journals and fields
    Journal of Informetrics, Vol. 7, issue 2, (2013).
    Link to pdf 

  95. Guilherme F. de Arruda, Thomas Kauê Dal'Maso Peron, Marinho Gomes de Andrade, Jorge Alberto Achcar, Francisco A. Rodrigues
    The influence of network properties on the synchronization of Kuramoto oscillators quantified by a Bayesian regression analysis
    Journal of Statistical Physics, Vol. 152, Issue 3, (2013).
    Link to pdf 


  96. 2012

  97. Lilian T. Gouveia, Guilherme Ferraz de Arruda, Francisco A. Rodrigues, Luciano Jose Senger and Luciano da F. Costa
    Supervised classification of basaltic aggregate particles based on texture properties
    Journal of Computing in Civil Engineering, 27(2), 177–182, (2013).
    Link to pdf 

  98. Thomas Kauê Dal'Maso Peron and Francisco A. Rodrigues
    Determining the critical coupling of explosive synchronization transitions in scale-free networks by mean-field approximations
    Physical Review E, vol. 86, issue 5, 056108, (2012).
    Link to pdf 

  99. Thomas Kauê Dal'Maso Peron and Francisco A. Rodrigues
    Explosive synchronization enhanced by time-delayed coupling
    Physical Review E, vol. 86, issue 1, 016102 (2012).
    Link to pdf 

  100. Guilherme Ferraz de Arruda, Luciano da Fontoura Costa, and Francisco A. Rodrigues
    A Complex Networks Approach for Data Clustering
    Physica A: Statistical Mechanics and its Applications, Vol. 391, Issue 23, (2012).
    Link to pdf 

  101. Thomas Kauê Dal'Maso Peron, Luciano da F. Costa and Francisco A. Rodrigues
    The structure and resilience of financial market networks
    Chaos, 22, 013117, (2012).
    Link to pdf 

  102. Andreas G. Tzakos, Vassiliki G. Kontogiann, Maria Tsoumani, Eleni Kyriakou, John Hwa, Francisco A. Rodrigues, Alexandros D. Tselepi
    Exploration of the antiplatelet activity profile of betulinic acid on human platelets
    Journal of Agricultural and Food Chemistry, 60 (28), pp 6977–6983, (2012).
    Link to pdf 


  103. 2011

  104. Thomas Kauê Dal'Maso Peron and Francisco A. Rodrigues
    Collective behavior in financial market
    Europhysics Letters. Vol. 96, 4, (2011).
    Link to pdf 

  105. Luciano da F.Costa, Osvaldo N. Oliveira Jr., Gonzalo Travieso, Francisco A. Rodrigues, Paulino R. Villas Boas, Lucas Antiqueira, Matheus P. Viana, Luis E. C. da Rocha
    Analyzing and Modeling Real-World Phenomena with Complex Networks: A Survey of Applications
    Advances in Physics, 60:3, pg 329-412, (2011).
    Link to pdf  Pre-print: Arxiv

  106. Francisco A. Rodrigues, L. da F. Costa and A. L. Barbieri
    Resilience of protein-protein interaction networks as determined by their large-scale topological features
    Molecular BioSystems, 7, 1263-1269, (2011).
    Link to pdf 

  107. Christoph Echtermeyer, Luciano da Fontoura Costa, Francisco A. Rodrigues, Marcus Kaiser
    Automatic network fingerprinting through single-node motifs
    PLoS ONE, issue 6, vol 6, (2011).
    Link to pdf 

  108. Andre L. Barbieri, Guilherme Arruda, Francisco A. Rodrigues, Odemir M. Bruno and Luciano da F. Costa
    An entropy-based approach to automatic image segmentation of satellite images
    Physica A: Statistical Mechanics and its Applications, v. 309, p. 512-518, 92011).
    Link to pdf 

  109. Fabrizio De Vico Fallani, Francisco A. Rodrigues, Luciano da Fontoura Costa, Laura Astolfid, Febo Cincotti, Donatella Mattia, Serenella Salinari and Fabio Babiloni
    Multiple pathways analysis of brain functional networks from EEG signals: an application to real data
    Brain Topography, Volume 23, Number 4, 344-354, (2011).
    Link to pdf 

  110. Anastasios A. Tsonis, Geli Wang, Kyle L. Swanson, Francisco A. Rodrigues and Luciano da Fontoura Costa
    Community structure and dynamics in climate networks
    Climate Dynamics, Volume 37, Numbers 5-6, 933-940, (2011).
    Link to pdf 


  111. 2010

  112. Luciano da F. Costa, Filipi N. Silva, Paulino R. Villas-Boas, and Francisco A. Rodrigues
    A pattern recognition approach to complex networks
    Journal of Statistical Mechanics, P11015, (2010).
    Link to pdf 

  113. Lucas Antiqueira, Francisco A. Rodrigues, Bernadette C van Wijk, Luciano F Costa, and Andreas Daffertshofer
    Estimating complex cortical networks via surface recordings - a critical note
    Neuroimage, 2(53), Pages 439-449, (2010).
    Link to pdf 

  114. Lilian T. Gouveia, Francisco A. Rodrigues and Luciano da F. Costa
    Multiscale curvature analysis of asphaltic aggregate particles
    Journal of Computing in Civil Engineering, Volume 24, Issue 6, pp. 506-513,(2010).
    Link to pdf 

  115. Paulino R. Villas-Boas, Francisco A. Rodrigues and Luciano da F. Costa
    Modeling the evolution of complex networks through the path-star transformation and optimal multivariate methods
    International Journal of Bifurcations and Chaos, Vol. 20, No. 3, 795–80, (2010).
    Link to pdf 

  116. Paulino R. Villas Boas, Francisco A. Rodrigues, Gonzalo Travieso, Luciano da F. Costa
    Sensitivity of complex networks measurements
    Journal of Statistical Mechanics, P03009, (2010).
    Link to pdf 

  117. Francisco A. Rodrigues and Luciano da F. Costa
    Generalized connectivity between any two nodes in a complex network
    Physical Review E, 81, 036113, 10 pages, (2010).
    Link to pdf 

  118. Fabrizio De Vico Fallani, Luciano da Fontoura Costa, Francisco A. Rodrigues, Laura Astolfid, Giovanni Vecchiato, Jlenia Toppi, Gianluca Borghini, Febo Cincotti, Donatella Mattia, Serenella Salinari, Roberto Isabella and Fabio Babiloni
    A graph-theoretical approach in brain functional networks. Possible implications in EEG studies
    Nonlinear Biomedical Physics, v. 23, p. 344-354, (2010).
    Link to pdf 


  119. 2009

  120. Francisco A. Rodrigues and Luciano da F. Costa
    Comparison of the interactomic networks of different species in terms of accessibility
    Molecular BioSystems, 6, 224 - 230, (2009).
    Link to pdf 

  121. Paulino R. Villas Boas, Francisco A. Rodrigues and Luciano da F. Costa
    Modeling Worldwide Highway Networks
    Physics Letters A, Volume 374, Issue 1, (2009).
    Link to pdf 

  122. Lucas Antiqueira, Francisco A. Rodrigues and Luciano da F. Costa
    Modeling Connectivity in Terms of Network Activity
    Journal of Statistical Mechanics, L09005 (2009).
    Link to pdf 

  123. Francisco A. Rodrigues and Luciano da Fontoura Costa
    A Signal propagation in cortical networks: A Digital Signal Processing Approach
    Frontiers in Neuroinformatics, 24 (3), (2009).
    Link to pdf 

  124. Francisco A. Rodrigues and Luciano da Fontoura Costa
    A Structure dynamic Approach to Cortical Organization: Number of Paths and Accessibility
    Journal of Neuroscience Methods, 1 (183), (2009).
    Link to pdf 

  125. Luciano da Fontoura Costa, Francisco A. Rodrigues, Claus C. Hilgetag and Marcus Kaiser
    Beyond the average: Detecting global singular nodes from local features in complex networks
    Europhysics Letters. 87, 18008, (2009).
    Link to pdf 

  126. Paulino R. Villas-Boas, Francisco A. Rodrigues and Luciano da F. Costa
    Modeling Highway Networks with Path-Geographical Transformations
    Book Chapter, Lecture Notes in Computer Science (2009).
    Link to pdf 

  127. Luciano da Fontoura Costa and Francisco A. Rodrigues
    Seeking for simplicity in complex networks
    Europhysics Letters, 85, 48001, (2009).
    Link to pdf 

  128. Francisco A. Rodrigues and Luciano da F. Costa
    Protein lethality investigated in terms of long range dynamical interactions
    Molecular BioSystems, 5, 385, (2009).
    Link to pdf 


  129. 2008

  130. Paulino R. Villas-Boas, Francisco A. Rodrigues, Gonzalo Travieso, Luciano da F. Costa
    Chain motifs: The tails and handles of complex networks
    Physical Review E, 77(2), 026106, (2008).
    Link to pdf 

  131. Paulino R. Villas Boas, Francisco A. Rodrigues, Gonzalo Travieso, Luciano da F. Costa
    Border trees of complex networks
    Journal of Physics A: Mathematical and Theoretical, 41, 224005, (2008).
    Link to pdf 

  132. Luciano da F. Costa, Francisco A. Rodrigues and Alexandre S. Cristino
    Complex networks: the key to systems biology
    Genetics and Molecular Biology,31(3), (2008).
    Link to pdf 


  133. 2007

  134. Luciano da F. Costa, Francisco A. Rodrigues and G. Travieso
    Analyzing Trails in Complex Networks
    Physical Review E, 71(1), (2007).
    Link to pdf 

  135. Francisco A. Rodrigues, Gonzalo Travieso and Luciano da F. Costa
    Fast Community Identification by Hierarchical Growth
    International Journal of Modern Physics C, v. 18, n. 6. Pages 937-947, (2007).
    Link to pdf 

  136. Luciano da F. Costa, Francisco A. Rodrigues, Gonzalo Travieso and P. R. Villas Boas
    Characterization of complex networks: A survey of measurements
    Advances in Physics, Volume 56, pages 167 - 242, 1, (2007).
    Link to pdf 


  137. 2006

  138. Luciano da F. Costa, Francisco A. Rodrigues and Gonzalo Travieso
    Protein domain connectivity and essentiality
    Applied Physics Letters 89, 174101 (2006).
    Link to pdf 


  139. 2005

  140. Francisco A. Rodrigues and Luciano da Fontoura Costa
    Surviving opinions in Sznajd models on complex networks
    International Journal of Modern Physics C, v. 16, n. 11, (2005).
    Link to pdf 


  141. Pre-prints

  142. Nastaran Lotfi, Francisco A Rodrigues
    On the effect of memory on the Prisoner's Dilemma game in correlated networks
    Pre-print: Arxiv

  143. José Carlos M. Silva, Diogo H. Silva, Francisco A. Rodrigues, Silvio C. Ferreira
    Comparison of theoretical approaches for epidemic processes with waning immunity in complex networks
    Pre-print: Arxiv

  144. Caroline L. Alves, Rubens Gisbert Cury, Kirstin Roster, Francisco A. Rodrigues, Christiane Thielemann, and Manuel Ciba
    Application of machine learning and complex network measures to an EEG dataset from ayahuasca experiments
    Under review.

  145. Caroline L. Alves, Thaise Toutain, Joel Augusto Moura Porto, Aruane M. Pineda,Francisco A. Rodrigues, Christiane Thielemann, and Manuel Ciba
    Application of machine learning and complex network measures to an EEG dataset from DMT experiments
    Under review.

  146. Michel Alexandre, Felipe Xavier, Thiago Christiano Silva and Francisco A. Rodrigues
    Nestedness in the Brazilian financial system
    Under review.

  147. Thomas Bouillet, Manuel Ciba, Caroline Laurenço Alves, Francisco A. Rodrigues, Christiane Thielemann, Morvane Colin, Luc Buée, and Sophie Halliez
    Revisiting tau involvement in complex neural network remodelling through the analysis of extracellular neuronal activity exhibited by organotypic brain slice co-cultures
    Under review (The Journal of Neuroscience).

  148. Tiago Martinelli, Diogo O. Soares-Pinto, and Francisco A. Rodrigues
    Shaking the causal tree: On the faithfulness and minimality assumptions beyond pairwise interactions
    Pre-print: Arxiv

  149. Paulo C. Ventura, Eric K. Tokuda, Luciano da F. Costa and Francisco A. Rodrigues
    A Markov chain for metapopulations of small sizes with attraction landscape
    Pre-print: Arxiv

  150. Michel Alexandre, Thiago Silva, Krzysztof Michalak and Francisco A. Rodrigues
    Default pecking order increases systemic risk
    Pre-print: Arxiv
    Under review.

  151. Kirstin Roster and Francisco A. Rodrigues
    Neural networks for dengue prediction: A systematic review
    Pre-print: Arxiv
    Under review (Tropical Medicine & International Health).

  152. Pedro L. Ramos, Eduardo Ramos, Francisco A. Rodrigues, Francisco Louzada
    A modified closed-form maximum likelihood estimator
    Pre-print: Arxiv
    Under review (Scandinavian Journal of Statistics).

  153. Bianca Oe, Marinho Andrade, Katiane Conceição, Pedro Ramos, Yamir Moreno and Francisco A. Rodrigues
    Prediction and inference of epidemic processes in networks: a beta regression model
    Under review.

  154. Pedro Luiz Ramos, Daniel C. F. Guzman, Alex L. Mota, Francisco A. Rodrigues and , Francisco Louzada
    Sampling with censored data: a practical guide
    Submitted for publication (The American Statistician).
    Pre-print: Arxiv

  155. Francisco A. Rodrigues, Thomas Peron, Colm Connaughton, and Yamir Moreno
    A machine learning approach to predicting dynamical observables from network structure
    Submitted for publication.
    Pre-print: Arxiv

  156. Paulo Cesar Ventura, Yamir Moreno and Francisco A. Rodrigues
    Epidemic spreading in populations of mobile agents with adaptive behavioral response
    Under review.

  157. Pedro Ramos and Francisco A. Rodrigues
    Scale-free networks: improved inference
    Under review.

  158. Luiz G. A. Alves, Bruno R. da Cunha, Francisco A. Rodrigues, and Pietro Panzarasa
    Topological and weighted rich-club effects in corruption networks
    Under review (Journal of Quantitative Criminology).

  159. Thomas Peron, Francisco A. Rodrigues, and Luciano da F. Costa
    Pattern pecognition approach to violin shapes of MIMO database
    Submitted for publication.
    pre-print: Arxiv

  160. Livia Akemi Hotta, Katiane Conceição, Marinho Gomes de Andrade, and Francisco A. Rodrigues
    The influence of network structure on species diversity
    Under review.

  161. Filipi N. Silva, Cesar H. Comin, Thomas K. DM. Peron, Francisco A. Rodrigues, Cheng Ye, Richard C. Wilson, Edwin Hancock, and Luciano da F. Costa
    On the modular dynamics of financial market networks
    pre-print: Arxiv

  162. Eduardo Ramos, Osafu A. Egbon, Pedro L. Ramos, Francisco A. Rodrigues and Francisco Louzada Eduardo Ramos, Osafu A. Egbon, Pedro L. Ramos, Francisco A. Rodrigues and Francisco Louzada
    Objective Bayesian analysis for the differential entropy of the Gamma distribution
    Under review (Journal of Statistical Computation and Simulation).
    pre-print: Arxiv


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